Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936024.1_cds_XP_016481681.1_72977
CDS Infomation

[gene=LOC107802659] [db_xref=GeneID:107802659] [protein=autophagy-related protein 13a-like] [protein_id=XP_016481681.1] [location=join(33695..35029,35174..35352,37069..37381)] [gbkey=CDS]
Sequence

ATGGATTTTCAGAATAATCCACAGGGTGAATATGGAAGGTTTGAACAGATACTTGCTCAA
TTTCTTCTTAAAACCTTGCATATTGTTTTGGACTGTAGAGTTCCTTCGATCCGACCTTAT
GGTCGTAGTGGAGAGGTGAAAAAGAGTGACAAGTGGTTCAATTTGGTGTTGGGAGATCGC
CCTGCTGTTCTTGAAAGTTTAAATTTTTGGCACAGAAATTTGATGGAACCAATGATAATA
GACATAATACTTGTTCAAGAGAAACCTAGTTCTTTGTCAGAGCATAGTTCAGGTACAGCA
TTCGCAGGGGCGTATACAGAAACCATCATAGAGAGGTGGGTTGTACAATATGAGTATCTG
AGGACAATGGTTCCTCAAGTTGGTGAATCTTCTTACAAGAAAACATACAAGAAATCAATT
ATACTGCTCCGCTCCCTATATTCAATGATGAGGCTCCTTCCTGCATTCAAGGCCTTCAGG
AAACTTTCATCAACTCAGAGTTGTGACTTTGATATCATTTACAAGGTCTCTTCATTTAGT
GCTCCATTCTCCAGGGCAGAGGAGGAGTTGATGAAGCATTATACTTTTACTCCAGTTGAT
GCCCAGCAGGGCCGTTTTTCTATATCTGTGTCATATCGTGAAAATCTGTCAGACTTTAAC
CTGGAGATTGCAGCATCCTTTCCGCCTGAGATCATCGCAGATTATGTAGGCAGTCCTCTT
ACTGACCCAATGAGATCATTTCCTTCTTCTTCATCTGATAAGGATGTCCGCCCTACATCA
TTTCCGTCGAGAGGGGCACAGTCATCTTCTTCATCACCTTTCCAGCGGCCGCACAGTTGG
ACAAGTGGTTTCCTCATGTCACCTTCTTTACCTCGGACCCAGCCATATGTAGGATCTCCA
CCTTTGTACCGCACACCACATGAGCTTTCATCTTCGCCTGGTGATGTATATGGGCAGAGG
GTTTCACCGAACAACAGATTGCCTATACACCACAAAGCGACGAGCTTTGATGAGTACCAG
CTTTCACCTCCATTTTCATCATCTCCATCCCCATCTCCACCCACATATATGTCAGGAGCA
AATCCTGGGCAGACTCGAATGCGTTCAGGAACTGGCCCTGTCAGTATCCCTCATCCAATG
ATGGGTACAAGTTCCAGATACCTATCTCCTAATTTGTCTGATCCTAACAGGCATTCTCTC
CCTCCAATGTCTCCCAGAAGCACAAAGCAGGATTCATCATCCAATGATTCCCCTTCTGGA
ATCAGGTCATTCCGGAAAATGGATCCACTAAGGACTCTAGAGTCTATTATCAGCACTATG
AGTCCTGGACAAAAGATTTCTAGAGATGCTAGAGATGATTCAGGGCGGTTCTCGGGCTTG
CTATCTTCAAGTGGTTCGCCACGTATATTTTCTAGAAGTTCTAGCAGACTGTCTTTTCAA
GATGACTTGGATGTCTTTGATTTTTCCTGTCCTTTTATTGTTGATGATGTCGATACTTCC
GATTCGCAAGTCAGTGAGAACCTTGATGGGAGAAAAGGTTCAGAAGTCTCTTCTCAAGCA
TCTGCAACAACCAGAAAATCCCAAGATGCCGCTGTAGGTGCCCTTGTTCACATGCTGAGA
ACTGCTCCTCCTTTGCGCCAAGATTCTAGCTGCTATACCTCACATAGCGTAAAGACTGAA
GTGGAGGGAGAACTTGGTACTGCATCTGGATTTTTCATCAATAGAAAGGCATCAGATGCT
CTTGAGGAGCTCAAAACTTACAAAGATTTGAAAGATCTACTACTGTCCAAGAGTGCAACC
CGTTCAGTCAGTGAGGGTGGAACTTAA

Peptide Sequence

PEP ID

XP_016481681.1
PEP Infomation

PREDICTED: autophagy-related protein 13a-like [Nicotiana tabacum]
Sequence

MDFQNNPQGEYGRFEQILAQFLLKTLHIVLDCRVPSIRPYGRSGEVKKSDKWFNLVLGDR
PAVLESLNFWHRNLMEPMIIDIILVQEKPSSLSEHSSGTAFAGAYTETIIERWVVQYEYL
RTMVPQVGESSYKKTYKKSIILLRSLYSMMRLLPAFKAFRKLSSTQSCDFDIIYKVSSFS
APFSRAEEELMKHYTFTPVDAQQGRFSISVSYRENLSDFNLEIAASFPPEIIADYVGSPL
TDPMRSFPSSSSDKDVRPTSFPSRGAQSSSSSPFQRPHSWTSGFLMSPSLPRTQPYVGSP
PLYRTPHELSSSPGDVYGQRVSPNNRLPIHHKATSFDEYQLSPPFSSSPSPSPPTYMSGA
NPGQTRMRSGTGPVSIPHPMMGTSSRYLSPNLSDPNRHSLPPMSPRSTKQDSSSNDSPSG
IRSFRKMDPLRTLESIISTMSPGQKISRDARDDSGRFSGLLSSSGSPRIFSRSSSRLSFQ
DDLDVFDFSCPFIVDDVDTSDSQVSENLDGRKGSEVSSQASATTRKSQDAAVGALVHMLR
TAPPLRQDSSCYTSHSVKTEVEGELGTASGFFINRKASDALEELKTYKDLKDLLLSKSAT
RSVSEGGT

Transcript Sequence

Gene sequence data has not been registered.